Sequence Assembly


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GenScalpel  v.1.0

GenScalpel is a program designed for specified-sequence retrieval and extraction from large-scale sequence sets in NCBI GenBank flatfile format. It provides user with a friendly window and menus environment for sequence assembly and analysis.

ABySS-Explorer  v.1.0.1

ABySS-Explorer is an interactive Java application that employs a novel graph-based representation to display a sequence assembly and associated meta data.





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Staden  v.9

A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows.

DIY Genomics  v.1.0.rc4

DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation.

Staden Package  v.rc

A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows.

OSLay  v.1.0

Sequence matching made easy. OSLay use synteny between matching sequences in a target assembly and a reference assembly to layout the contigs (or scaffolds) in the target assembly. The tool provides an interactive visualization of the computed layout

Mallard  v.1.02

Sequence analysis made easy. Mallard is a software for screening 16S rRNA clone libraries, and similar multiple sequence alignments for chimeras and other anomalies.The nature of DNA sequencing is such that artifacts are inevitably introduced and,

Sequence Matrix  v.1.7.8

Analyze phylogenetic data matrices with this tool. Sequence Matrix facilitates the assembly of phylogenetic data matrices with multiple genes. Files for individual genes are dragged and dropped into a window and the sequences are concatenated.

Assembly Analyzer  v.1.5

Assembly Analyzer allows the user to view the resources and metadata contained within .

CLC Sequence Viewer  v.6. 5. 2003

CLC Sequence Viewer creates a software environment enabling users to make a large number of bioinformatics analyses, combined with smooth data management, and excellent graphical viewing and output options.

Common Assembly Language for  v.1.0

Common Assembly Language for Microprocessor (CALM) is an assembly language integrated in Smile NG software. Welcome to Smile NG, the brand new development environment for microcontroller based systems.

Assembly Studio 8x  v.4.0.0.4

Assembly Studio 8x is the earliest attempt at a z80 assembly IDE. It supports both the 83 series and the 85 series (both are z80 processors). It has a built in assembler (ZASM?) which makes compiling easier.

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